1. 主頁
  2. Shum, Ho Hin

沈灝軒

蘇德鈺, 博士後研究員, 公共衞生實驗室科學, phone: 2831 5494, email: soty@hku.hk
博士後研究員

公共衞生實驗室科學

  • Bachelor of Science (Major in Risk Management and Biotechnology and Molecular Biology) (HKU), Doctor of Philosophy (Bioinformatics) (HKU)
phone 3917 9979
email mhhshum@hku.hk
pub med PubMed
個人簡介

Dr Shum Ho-hin is a genomic scientist with an interdisciplinary background in microbiology and bioinformatics. He has been studying emerging viral and bacterial pathogens from a One Health perspective, particularly in environmental and animal sectors. In particular, he has expertise in genomics, metagenomics, microbiome research, bioinformatics, and phylogenetic analysis, which are relevant to this proposed study. He has more than five years of experience in investigating the emergence of infectious diseases, including SARS-CoV-2, Burkholderia pseudomallei, and antimicrobial resistance, using next-generation sequencing technology, core genome analysis, and phylogenetic methods. He is also experienced in the development of bioinformatic programmes for phylogenetic analyses to track the emergence of infectious diseases.


發表的部分文章
  1. Shum Marcus HH, Lee Y, Tam L, Xia H, Chung OL, Guo Z, Lam TT. Binding affinity between coronavirus spike protein and human ACE2 receptor. (2024). Comput Struct Biotechnol J. Impact Factor (2024)=4.1. Ranked 11/49 in Structural Biology.
  2. Ni XB, Pei Y, Ye YT, Shum Marcus HH, Cui XM, Wu YQ, Pierce MP, Zhao L, Wang GP, Wei JT, Fan JL, Wang Q, Smith DK, Sun Y, Du LF, Zhang J, Jiang JF, He PJ, Chen X, Wei H, Zhao NQ, Cao WC, Lam TT, Jia N. Tick Genome and Microbiome Consortium. Ecoclimate drivers shape virome diversity in a globally invasive tick species. (2024). ISME J. Impact Factor (2024)=10.0. Ranked 8/742 in Ecology, Evolution, Behavior and Systematics.
  3. Pei Y, Shum Marcus HH, Liao Y, Leung VW, Gong YN, Smith DK, Yin X, Guan Y, Luo R, Zhang T, Lam TT. ARGNet: using deep neural networks for robust identification and classification of antibiotic resistance genes from sequences. (2024). Microbiome. Impact Factor (2024)=12.7. Ranked 7/185 in Microbiology.
  4. Ye Y, Shum Marcus HH, Tsui JL, Yu G, Smith DK, Zhu H, Wu JT, Guan Y, Lam TT. Robust expansion of phylogeny for fast-growing genome sequence data. (2024). PLoS Comput Biol. Impact Factor (2024)=3.6. Ranked 14/199 in Computational Theory and Mathematics.
  5. Yin X, Chen X, Jiang XT, Yang Y, Li B, Shum Marcus HH, Lam TTY, …, Zhang T. Toward a Universal Unit for Quantification of Antibiotic Resistance Genes in Environmental Samples. (2023). Environ. Sci. Technol. Impact Factor (2024)=11.3. Ranked 26/1950 in Environmental Science.
  6. Wu WG, Shum Marcus HH*, Wong IT, …, Lam TT, Luk KS, Siu GK. Probable airborne transmission of Burkholderia pseudomallei causing an urban outbreak of melioidosis during typhoon season in Hong Kong, China. (2023). Emerg Microbes Infect. Impact Factor (2024)=7.5. Ranked 7/137 in Infectious Diseases.
  7. Ni, XB., Cui, XM., Liu, JY., Shum Marcus HH, et al. Metavirome of 31 tick species provides a compendium of 1,801 RNA virus genomes. (2023). Nat Microbiol 8, 162–173. Impact Factor (2024)=19.4. Ranked 3/185 in Microbiology.
  8. Miot EF, Worthington BM, Ng KH, de Lataillade LG, Pierce MP, Liao Y, Ko R, Shum Marcus HH, Cheung WY, Holmes EC, Leung KS, Zhu H, Poon LL, Peiris MJ, Guan Y, Leung GM, Wu JT, Lam TT. Surveillance of Rodent Pests for SARS-CoV-2 and Other Coronaviruses, Hong Kong. (2022). Emerg Infect Dis. Impact Factor (2024)=7.5. Ranked 7/137 in Infectious Diseases.
  9. Leung Kathy, Shum Marcus HH, Leung Gabriel M, et. al. Early transmissibility assessment of the N501Y mutant strains of SARS-CoV-2 in the United Kingdom, October to November 2020. (2021) Euro Surveill. 26(1). Impact Factor (2024)=7.8. Ranked 13/160 in Epidemiology.
  10. Tommy TY Lam*, N Jia*, YW Zhang*, Shum Marcus HH*, et. al. Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins. (2021). Nature. 583: 282-285. Impact Factor (2024)=48.5. Ranked 1/213 in Multidisciplinary.

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